HIV Target gene Detail Information

> ZNF253 Gene Search Result

Gene Information

Gene Name	ZNF253
Gene ID	56242
Gene Full Name	zinc finger protein 253
Gene Alias	BMZF1; BMZF-1; ZNF411
Transcripts	ENSG00000256771
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	O75346
HGNC ID	HGNC:13497
VEGA ID	OTTHUMG00000182369
OMIM ID	606954
String ID	9606.ENSP00000468720
PharmGKB ID	PA37785

Target gene [ZNF253] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4007177	chr19	10	10		20	View
4009147	chr19	12			12	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ZNF253 expression and immune infiltrating cell level correlation result in HIV+ samples
ZNF253 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).