HBV Target gene Detail Information

> ZNF236 Gene Search Result


Gene Information
Gene Name ZNF236
Gene ID 7776
Gene Full Name zinc finger protein 236
Gene Alias ZNF236A; ZNF236B
Transcripts ENSG00000130856
Virus HBV
Gene Type protein coding
HPA Location Info Cell Junctions;Nucleoplasm;Cytosol;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q9UL36
HGNC ID HGNC:13028
VEGA ID OTTHUMG00000179331
OMIM ID 604760
String ID 9606.ENSP00000253159
PharmGKB ID PA37606
Target gene [ZNF236] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005833 chr18 46 1 47 View
1005968 chr18 45 45 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZNF236 expression and immune infiltrating cell level correlation result in HBV+ samples
ZNF236 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).