HBV Target gene Detail Information

> ZNF19 Gene Search Result


Gene Information
Gene Name ZNF19
Gene ID 7567
Gene Full Name zinc finger protein 19
Gene Alias KOX12
Transcripts ENSG00000157429
Virus HBV
Gene Type protein coding
HPA Location Info Mitochondria;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID P17023
HGNC ID HGNC:12981
VEGA ID OTTHUMG00000137593
OMIM ID 194525
String ID 9606.ENSP00000288177
PharmGKB ID PA37562
Target gene [ZNF19] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013699 chr16 3 1 4 View
1403883 chr16 3 1 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZNF19 expression and immune infiltrating cell level correlation result in HBV+ samples
ZNF19 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).