HBV Target gene Detail Information

> ZMYND8 Gene Search Result


Gene Information
Gene Name ZMYND8
Gene ID 23613
Gene Full Name zinc finger MYND-type containing 8
Gene Alias RACK7; PRKCBP1; PRO2893
Transcripts ENSG00000101040
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Golgi apparatus;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9ULU4
HGNC ID HGNC:9397
VEGA ID OTTHUMG00000032667
OMIM ID 615713
String ID 9606.ENSP00000420095
PharmGKB ID PA162409890
Target gene [ZMYND8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014265 chr20 3 1 4 View
1014266 chr20 3 1 4 View
1400320 chr20 28 4 32 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZMYND8 expression and immune infiltrating cell level correlation result in HBV+ samples
ZMYND8 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).