HBV Target gene Detail Information

> ZMYND11 Gene Search Result


Gene Information
Gene Name ZMYND11
Gene ID 10771
Gene Full Name zinc finger MYND-type containing 11
Gene Alias BS69; BRAM1; MRD30
Transcripts ENSG00000015171
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Gene Function Suppressor gene
Uniport_ID Q15326
HGNC ID HGNC:16966
VEGA ID OTTHUMG00000017526
OMIM ID 608668
String ID 9606.ENSP00000381053
PharmGKB ID PA128394578
Target gene [ZMYND11] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001696 chr10 345 78 98 521 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZMYND11 expression and immune infiltrating cell level correlation result in HBV+ samples
ZMYND11 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).