HBV Target gene Detail Information

> ZMAT4 Gene Search Result


Gene Information
Gene Name ZMAT4
Gene ID 79698
Gene Full Name zinc finger matrin-type 4
Transcripts ENSG00000165061
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9H898
HGNC ID HGNC:25844
VEGA ID OTTHUMG00000164049
String ID 9606.ENSP00000297737
PharmGKB ID PA142670525
Target gene [ZMAT4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012226 chr8 1 3 3 7 View
1012964 chr8 4 2 6 View
1013097 chr8 4 1 5 View
1017723 chr8 0 View
1017724 chr8 0 View
1402990 chr8 4 1 5 View
1403270 chr8 0 View
1403271 chr8 0 View
1404547 chr8 5 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZMAT4 expression and immune infiltrating cell level correlation result in HBV+ samples
ZMAT4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).