HIV Target gene Detail Information

> ZGRF1 Gene Search Result


Gene Information
Gene Name ZGRF1
Gene ID 55345
Gene Full Name zinc finger GRF-type containing 1
Gene Alias C4orf21
Transcripts ENSG00000138658
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q86YA3
HGNC ID HGNC:25654
VEGA ID OTTHUMG00000132908
String ID 9606.ENSP00000424737
PharmGKB ID PA144596502
Target gene [ZGRF1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4008708 chr4 3 11 14 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ZGRF1 expression and immune infiltrating cell level correlation result in HIV+ samples
ZGRF1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).