HBV Target gene Detail Information

> ZFP36L1 Gene Search Result


Gene Information
Gene Name ZFP36L1
Gene ID 677
Gene Full Name ZFP36 ring finger protein like 1
Gene Alias BRF1; ERF1; cMG1; ERF-1; Berg36; TIS11B; RNF162B
Transcripts ENSG00000185650
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q07352
HGNC ID HGNC:1107
VEGA ID OTTHUMG00000171385
OMIM ID 601064
String ID 9606.ENSP00000388402
PharmGKB ID PA35027
Target gene [ZFP36L1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002361 chr14 266 20 286 View
1002362 chr14 266 20 286 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZFP36L1 expression and immune infiltrating cell level correlation result in HBV+ samples
ZFP36L1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).