HBV Target gene Detail Information

> ZFP1 Gene Search Result


Gene Information
Gene Name ZFP1
Gene ID 162239
Gene Full Name ZFP1 zinc finger protein
Gene Alias ZNF475
Transcripts ENSG00000285178
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q6P2D0
HGNC ID HGNC:23328
VEGA ID OTTHUMG00000137602
OMIM ID 617230
String ID 9606.ENSP00000377080
PharmGKB ID PA134882678
Target gene [ZFP1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002657 chr16 223 6 229 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZFP1 expression and immune infiltrating cell level correlation result in HBV+ samples
ZFP1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).