HBV Target gene Detail Information

> ZFHX3 Gene Search Result


Gene Information
Gene Name ZFHX3
Gene ID 463
Gene Alias ATBT; ATBF1; ZFH-3; ZNF927; C16orf47
Transcripts ENSG00000140836
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Gene Function Suppressor gene
Uniport_ID Q15911
HGNC ID HGNC:777
VEGA ID OTTHUMG00000137599
OMIM ID 104155
String ID 9606.ENSP00000268489
PharmGKB ID PA162409676
Target gene [ZFHX3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005514 chr16 41 8 4 53 View
1006260 chr16 13 12 16 41 View
1012403 chr16 7 7 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZFHX3 expression and immune infiltrating cell level correlation result in HBV+ samples
ZFHX3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).