HBV Target gene Detail Information

> ZEB1 Gene Search Result


Gene Information
Gene Name ZEB1
Gene ID 6935
Gene Full Name zinc finger E-box binding homeobox 1
Gene Alias BZP; TCF8; AREB6; FECD6; NIL2A; PPCD3; ZFHEP; ZFHX1A; DELTAEF1
Transcripts ENSG00000148516
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Nucleoli;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID P37275
HGNC ID HGNC:11642
VEGA ID OTTHUMG00000017907
OMIM ID 189909
String ID 9606.ENSP00000354487
PharmGKB ID PA162409589
Target gene [ZEB1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011690 chr10 8 8 View
1011691 chr10 8 8 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZEB1 expression and immune infiltrating cell level correlation result in HBV+ samples
ZEB1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).