HBV Target gene Detail Information

> ZDHHC19 Gene Search Result


Gene Information
Gene Name ZDHHC19
Gene ID 131540
Gene Full Name zinc finger DHHC-type containing 19
Gene Alias DHHC19
Transcripts ENSG00000163958
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted membrane proteins
Uniport_ID Q8WVZ1
HGNC ID HGNC:20713
VEGA ID OTTHUMG00000133642
OMIM ID 618671
String ID 9606.ENSP00000296326
PharmGKB ID PA134871748
Target gene [ZDHHC19] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000527 chr3 64 1051 887 2002 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZDHHC19 expression and immune infiltrating cell level correlation result in HBV+ samples
ZDHHC19 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).