HIV Target gene Detail Information

> ZC3H7A Gene Search Result


Gene Information
Gene Name ZC3H7A
Gene ID 29066
Gene Full Name zinc finger CCCH-type containing 7A
Gene Alias ZC3H7; HSPC055; ZC3HDC7
Transcripts ENSG00000122299
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8IWR0
HGNC ID HGNC:30959
VEGA ID OTTHUMG00000129825
String ID 9606.ENSP00000379773
PharmGKB ID PA128394652
Target gene [ZC3H7A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002155 chr16 94 14 1 109 View
4006717 chr16 23 23 View
4006985 chr16 21 21 View
4008456 chr16 15 15 View
4009226 chr16 3 9 12 View
4012400 chr16 5 5 View
4016756 chr16 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ZC3H7A expression and immune infiltrating cell level correlation result in HIV+ samples
ZC3H7A expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of ZC3H7A expression and immune infiltrating cell level correlation result in HIV+ samples
ZC3H7A expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).