HIV Target gene Detail Information

> ZC3H18 Gene Search Result

Gene Information

Gene Name	ZC3H18
Gene ID	124245
Gene Full Name	zinc finger CCCH-type containing 18
Gene Alias	NHN1
Transcripts	ENSG00000158545
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q86VM9
HGNC ID	HGNC:25091
VEGA ID	OTTHUMG00000137679
String ID	9606.ENSP00000416951
PharmGKB ID	PA162409533

Target gene [ZC3H18] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000953	chr16	125	102	14	241	View
4001057	chr16	35	179	9	223	View
4002900	chr16	60	14	2	76	View
4005753	chr16	21	8	2	31	View
4010198	chr16	8	1		9	View
4011132	chr16	5	2		7	View
4011580	chr16	4	2		6	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ZC3H18 expression and immune infiltrating cell level correlation result in HIV+ samples
ZC3H18 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of ZC3H18 expression and immune infiltrating cell level correlation result in HIV+ samples
ZC3H18 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).