HIV Target gene Detail Information

> YIF1B Gene Search Result

Gene Information

Gene Name	YIF1B
Gene ID	90522
Gene Full Name	Yip1 interacting factor homolog B, membrane trafficking protein
Gene Alias	FinGER8
Transcripts	ENSG00000167645
Virus	HIV
Gene Type	protein coding
HPA Location Info	Vesicles;Golgi apparatus;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q5BJH7
HGNC ID	HGNC:30511
VEGA ID	OTTHUMG00000182324
OMIM ID	619109
String ID	9606.ENSP00000343435
PharmGKB ID	PA142670561

Target gene [YIF1B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002380	chr19	54	42	1	97	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of YIF1B expression and immune infiltrating cell level correlation result in HIV+ samples
YIF1B expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of YIF1B expression and immune infiltrating cell level correlation result in HIV+ samples
YIF1B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).