HBV Target gene Detail Information

> YEATS4 Gene Search Result

Gene Information

Gene Name	YEATS4
Gene ID	8089
Gene Full Name	YEATS domain containing 4
Gene Alias	YAF9; GAS41; NUBI-1; 4930573H17Rik; B230215M10Rik
Transcripts	ENSG00000127337
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Nuclear membrane;
HPA Protein Class Info	Predicted intracellular proteins
Gene Function	Oncogene
Uniport_ID	O95619
HGNC ID	HGNC:24859
VEGA ID	OTTHUMG00000169358
OMIM ID	602116
String ID	9606.ENSP00000247843
PharmGKB ID	PA134992686

Target gene [YEATS4] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1005576	chr12	39	12		51	View
1403110	chr12	39	12		51	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE114783 (GEO)	Chronic HBV (CHB) infection	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO)	Hepatocellular carcinoma	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO)	Liver cirrhosis	36	Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783
HeatMap of cell type fractions in all samples	Lollipop of YEATS4 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
YEATS4 expression: Low -> High
Lollipop of YEATS4 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples	Lollipop of YEATS4 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples


> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of YEATS4 expression and immune infiltrating cell level correlation result in HBV+ samples
YEATS4 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).