HIV Target gene Detail Information

> YBX3 Gene Search Result

Gene Information

Gene Name	YBX3
Gene ID	8531
Gene Full Name	Y-box binding protein 3
Gene Alias	CSDA; DBPA; CSDA1; ZONAB
Transcripts	ENSG00000060138
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	P16989
HGNC ID	HGNC:2428
VEGA ID	OTTHUMG00000168409
OMIM ID	603437
String ID	9606.ENSP00000228251
PharmGKB ID	PA26929

Target gene [YBX3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4010001	chr12	10			10	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of YBX3 expression and immune infiltrating cell level correlation result in HIV+ samples
YBX3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).