HBV Target gene Detail Information

> XPA Gene Search Result

Gene Information

Gene Name	XPA
Gene ID	7507
Gene Full Name	XPA, DNA damage recognition and repair factor
Gene Alias	XP1; XPAC
Transcripts	ENSG00000136936
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytokinetic bridge;
HPA Protein Class Info	Cancer-related genes, Disease related genes, Predicted intracellular proteins
Uniport_ID	P23025
HGNC ID	HGNC:12814
VEGA ID	OTTHUMG00000020330
OMIM ID	611153
String ID	9606.ENSP00000364270
PharmGKB ID	PA368

Target gene [XPA] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1000085	chr9	3705	2177	1710	7592	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of XPA expression and immune infiltrating cell level correlation result in HBV+ samples
XPA expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).