HBV Target gene Detail Information

> XKR6 Gene Search Result


Gene Information
Gene Name XKR6
Gene ID 286046
Gene Full Name XK related 6
Gene Alias XRG6; C8orf5; C8orf7; C8orf21
Transcripts ENSG00000171044
Virus HBV
Gene Type protein coding
HPA Location Info Actin filaments;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q5GH73
HGNC ID HGNC:27806
VEGA ID OTTHUMG00000129351
String ID 9606.ENSP00000416707
PharmGKB ID PA134922549
Target gene [XKR6] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010496 chr8 8 4 12 View
1400268 chr8 14 5 1 20 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of XKR6 expression and immune infiltrating cell level correlation result in HBV+ samples
XKR6 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).