HBV Target gene Detail Information

> WRAP53 Gene Search Result


Gene Information
Gene Name WRAP53
Gene ID 55135
Gene Full Name WD repeat containing antisense to TP53
Gene Alias DKCB3; TCAB1; WDR79
Transcripts ENSG00000141499
Virus HBV
Gene Type protein coding
HPA Location Info Nuclear bodies;Cytosol;Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q9BUR4
HGNC ID HGNC:25522
VEGA ID OTTHUMG00000134323
OMIM ID 612661
String ID 9606.ENSP00000324203
PharmGKB ID PA164727568
Target gene [WRAP53] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000207 chr17 588 1996 1642 4226 View
1001360 chr17 551 136 75 762 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of WRAP53 expression and immune infiltrating cell level correlation result in HBV+ samples
WRAP53 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).