HBV Target gene Detail Information

> WNT5B Gene Search Result


Gene Information
Gene Name WNT5B
Gene ID 81029
Gene Full Name Wnt family member 5B
Transcripts ENSG00000111186
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;Predicted to be secreted;
HPA Protein Class Info Predicted secreted proteins
Uniport_ID Q9H1J7
HGNC ID HGNC:16265
VEGA ID OTTHUMG00000090375
OMIM ID 606361
String ID 9606.ENSP00000380379
PharmGKB ID PA38104
Target gene [WNT5B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008967 chr12 6 11 1 18 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of WNT5B expression and immune infiltrating cell level correlation result in HBV+ samples
WNT5B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).