HBV Target gene Detail Information

> WNK2 Gene Search Result


Gene Information
Gene Name WNK2
Gene ID 65268
Gene Full Name WNK lysine deficient protein kinase 2
Gene Alias PRKWNK2; NY-CO-43; SDCCAG43; P/OKcl.13
Transcripts ENSG00000165238
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Enzymes, Plasma proteins, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID Q9Y3S1
HGNC ID HGNC:14542
VEGA ID OTTHUMG00000020247
OMIM ID 606249
String ID 9606.ENSP00000297954
PharmGKB ID PA33783
Target gene [WNK2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009474 chr9 7 8 15 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of WNK2 expression and immune infiltrating cell level correlation result in HBV+ samples
WNK2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).