HTLV1 Target gene Detail Information

> WDR37 Gene Search Result

Gene Information

Gene Name	WDR37
Gene ID	22884
Gene Full Name	WD repeat domain 37
Transcripts	ENSG00000047056
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Intermediate filaments;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9Y2I8
HGNC ID	HGNC:31406
VEGA ID	OTTHUMG00000017540
OMIM ID	618586
String ID	9606.ENSP00000350954
PharmGKB ID	PA134922218

Target gene [WDR37] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6006232	chr10	53	19		72	View
6011556	chr10	25	1		26	View
6016556	chr10	12			12	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of WDR37 expression and immune infiltrating cell level correlation result in HTLV1+ samples
WDR37 expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of WDR37 expression and immune infiltrating cell level correlation result in HTLV1+ samples
WDR37 expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of WDR37 expression and immune infiltrating cell level correlation result in HTLV1+ samples
WDR37 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).