HBV Target gene Detail Information

> WASH5P Gene Search Result


Gene Information
Gene Name WASH5P
Gene ID 375690
Transcripts ENSG00000282458
Virus HBV
Gene Type pseudo
HPA Location Info
HGNC ID HGNC:33884
VEGA ID OTTHUMG00000180466
Target gene [WASH5P] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015931 chr19 1 1 2 View
1016331 chr19 1 1 View
1402224 chr19 145 52 33 230 View
1402225 chr19 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of WASH5P expression and immune infiltrating cell level correlation result in HBV+ samples
WASH5P expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).