HBV Target gene Detail Information

> VWA5B1 Gene Search Result


Gene Information
Gene Name VWA5B1
Gene ID 127731
Gene Full Name von Willebrand factor A domain containing 5B1
Transcripts ENSG00000158816
Virus HBV
Gene Type protein coding
HPA Location Info Mitochondria;Cytosol;Plasma membrane;Predicted to be secreted;
HPA Protein Class Info Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q5TIE3
HGNC ID HGNC:26538
VEGA ID OTTHUMG00000002835
String ID 9606.ENSP00000364220
PharmGKB ID PA162409030
Target gene [VWA5B1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015372 chr1 2 2 View
1400281 chr1 5 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of VWA5B1 expression and immune infiltrating cell level correlation result in HBV+ samples
VWA5B1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).