Gene Information
Gene Name
|
VTI1A |
Gene ID
|
143187
|
Gene Full Name
|
vesicle transport through interaction with t-SNAREs 1A |
Gene Alias
|
MMDS3; MVti1; VTI1RP2; Vti1-rp2 |
Transcripts
|
ENSG00000151532
|
Virus
|
HBV |
Gene Type
|
protein coding |
HPA Location Info
|
Golgi apparatus;Vesicles;
|
Membrane Info
|
Predicted membrane proteins |
HPA Protein Class Info
|
Predicted intracellular proteins, Predicted membrane proteins |
Uniport_ID
|
Q96AJ9
|
HGNC ID
|
HGNC:17792
|
VEGA ID
|
OTTHUMG00000019063
|
OMIM ID
|
614316 |
String ID
|
9606.ENSP00000376792
|
PharmGKB ID
|
PA134928049
|
Target gene [VTI1A] related to VISs
DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
1002949 |
chr10 |
144 |
39 |
2 |
185 |
View |
1002971 |
chr10 |
142 |
38 |
2 |
182 |
View |
1008588 |
chr10 |
20 |
|
|
20 |
View |
1015384 |
chr10 |
|
2 |
|
2 |
View |
Relationship between gene expression and immune infiltrating cell level
Data ID |
Disease |
Sample number |
Sample type |
GSE114783 (GEO) |
Chronic HBV (CHB) infection |
36 |
Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3) |
GSE114783 (GEO) |
Hepatocellular carcinoma |
36 |
Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3) |
GSE114783 (GEO) |
Liver cirrhosis |
36 |
Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3) |
LIHC (TCGA) |
Liver hepatocellular carcinoma |
424 |
Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18) |
> Dataset: GSE114783
|
HeatMap of cell type fractions in all samples
|
Lollipop of VTI1A expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
|
VTI1A expression: Low -> High
|
|
Lollipop of VTI1A expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples
|
Lollipop of VTI1A expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples
|
|
|
|
> Dataset: LIHC
|
HeatMap of cell type fractions in all samples
|
Lollipop of VTI1A expression and immune infiltrating cell level correlation result in HBV+ samples
|
VTI1A expression: Low -> High
|
|
|
|
|