HIV Target gene Detail Information

> VSIG1 Gene Search Result

Gene Information

Gene Name	VSIG1
Gene ID	340547
Gene Full Name	V-set and immunoglobulin domain containing 1
Gene Alias	GPA34; dJ889N15.1; 1700062D20Rik
Transcripts	ENSG00000101842
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Vesicles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q86XK7
HGNC ID	HGNC:28675
VEGA ID	OTTHUMG00000022175
OMIM ID	300620
String ID	9606.ENSP00000402219
PharmGKB ID	PA134944198

Target gene [VSIG1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005513	chrX	18	14		32	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of VSIG1 expression and immune infiltrating cell level correlation result in HIV+ samples
VSIG1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).