HPV Target gene Detail Information

> VPS13D Gene Search Result


Gene Information
Gene Name VPS13D
Gene ID 55187
Gene Full Name vacuolar protein sorting 13 homolog D
Gene Alias SCAR4
Transcripts ENSG00000048707
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;Vesicles;Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5THJ4
HGNC ID HGNC:23595
VEGA ID OTTHUMG00000013155
OMIM ID 608877
String ID 9606.ENSP00000478104
PharmGKB ID PA134970144
Target gene [VPS13D] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004086 chr1 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).