HIV Target gene Detail Information

> VPS13D Gene Search Result

Gene Information

Gene Name	VPS13D
Gene ID	55187
Gene Full Name	vacuolar protein sorting 13 homolog D
Gene Alias	SCAR4
Transcripts	ENSG00000048707
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Vesicles;Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q5THJ4
HGNC ID	HGNC:23595
VEGA ID	OTTHUMG00000013155
OMIM ID	608877
String ID	9606.ENSP00000478104
PharmGKB ID	PA134970144

Target gene [VPS13D] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000513	chr1	172	56	179	407	View
4002268	chr1	94	8		102	View
4002305	chr1	24	59	17	100	View
4003984	chr1	49	2		51	View
4006981	chr1	17	4		21	View
4007028	chr1	21			21	View
4007029	chr1	19	2		21	View
4007644	chr1	12	4	2	18	View
4009878	chr1	10			10	View
4010811	chr1	1	6	1	8	View
4011665	chr1	5		1	6	View
4012825	chr1	4			4	View
4013828	chr1	3			3	View
4100031	chr1	11	2		13	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).