HTLV1 Target gene Detail Information

> VPS13B Gene Search Result

Gene Information

Gene Name	VPS13B
Gene ID	157680
Gene Full Name	vacuolar protein sorting 13 homolog B
Gene Alias	CHS1; COH1
Transcripts	ENSG00000132549
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cell Junctions;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q7Z7G8
HGNC ID	HGNC:2183
VEGA ID	OTTHUMG00000140383
OMIM ID	607817
String ID	9606.ENSP00000351346
PharmGKB ID	PA26699

Target gene [VPS13B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6002796	chr8	208	1		209	View
6007606	chr8	40	12	1	53	View
6010420	chr8	30	1		31	View
6020339	chr8		4	3	7	View
6021581	chr8	2	4		6	View
6023544	chr8	2		2	4	View
6024746	chr8	1	2		3	View
6028309	chr8		1		1	View
6028746	chr8		1		1	View
6029578	chr8	1			1	View
6029579	chr8	1			1	View
6032783	chr8				0	View
6032971	chr8				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).