HTLV1 Target gene Detail Information

> VMP1 Gene Search Result


Gene Information
Gene Name VMP1
Gene ID 81671
Gene Full Name vacuole membrane protein 1
Gene Alias EPG3; TANGO5; TMEM49
Transcripts ENSG00000062716
Virus HTLV1
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;Nucleoli;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q96GC9
HGNC ID HGNC:29559
VEGA ID OTTHUMG00000179882
OMIM ID 611753
String ID 9606.ENSP00000262291
PharmGKB ID PA142670765
Target gene [VMP1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010973 chr17 24 4 28 View
6014689 chr17 12 4 16 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).