HIV Target gene Detail Information

> VCPIP1 Gene Search Result

Gene Information

Gene Name	VCPIP1
Gene ID	80124
Gene Full Name	valosin containing protein interacting protein 1
Gene Alias	DUBA3; VCIP135
Transcripts	ENSG00000175073
Virus	HIV
Gene Type	protein coding
HPA Location Info	Plasma membrane;Centrosome;
HPA Protein Class Info	Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q96JH7
HGNC ID	HGNC:30897
VEGA ID	OTTHUMG00000164560
OMIM ID	611745
String ID	9606.ENSP00000309031
PharmGKB ID	PA142670629

Target gene [VCPIP1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004030	chr8	25	25		50	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of VCPIP1 expression and immune infiltrating cell level correlation result in HIV+ samples
VCPIP1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of VCPIP1 expression and immune infiltrating cell level correlation result in HIV+ samples
VCPIP1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).