HIV Target gene Detail Information

> VCL Gene Search Result


Gene Information
Gene Name VCL
Gene ID 7414
Gene Full Name vinculin
Gene Alias MV; MVCL; CMD1W; CMH15; HEL114
Transcripts ENSG00000035403
Virus HIV
Gene Type protein coding
HPA Location Info Focal adhesion sites;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID P18206
HGNC ID HGNC:12665
VEGA ID OTTHUMG00000018498
OMIM ID 193065
String ID 9606.ENSP00000211998
PharmGKB ID PA37288
Target gene [VCL] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000067 chr10 541 599 254 1394 View
4003074 chr10 64 6 70 View
4005659 chr10 23 6 1 30 View
4010940 chr10 7 1 8 View
4100006 chr10 3 11 3 17 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).