HBV Target gene Detail Information

> VCAN Gene Search Result

Gene Information

Gene Name	VCAN
Gene ID	1462
Gene Full Name	versican
Gene Alias	WGN; ERVR; GHAP; PG-M; WGN1; CSPG2
Transcripts	ENSG00000038427
Virus	HBV
Gene Type	protein coding
HPA Location Info	Vesicles;Predicted to be secreted;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID	P13611
HGNC ID	HGNC:2464
VEGA ID	OTTHUMG00000131321
OMIM ID	118661
String ID	9606.ENSP00000265077
Drugbank ID	BE0004606
PharmGKB ID	PA162408788

Target gene [VCAN] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1005234	chr5	44	12	2	58	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of VCAN expression and immune infiltrating cell level correlation result in HBV+ samples
VCAN expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).