HIV Target gene Detail Information

> VAPB Gene Search Result


Gene Information
Gene Name VAPB
Gene ID 9217
Gene Full Name VAMP associated protein B and C
Gene Alias ALS8; VAP-B; VAMP-B
Transcripts ENSG00000124164
Virus HIV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID O95292
HGNC ID HGNC:12649
VEGA ID OTTHUMG00000032840
OMIM ID 605704
String ID 9606.ENSP00000417175
PharmGKB ID PA37273
Target gene [VAPB] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4005087 chr20 28 8 36 View
4015534 chr20 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).