HIV Target gene Detail Information

> VAPA Gene Search Result

Gene Information

Gene Name	VAPA
Gene ID	9218
Gene Full Name	VAMP associated protein A
Gene Alias	VAP-A; VAP33; VAP-33; hVAP-33
Transcripts	ENSG00000101558
Virus	HIV
Gene Type	protein coding
HPA Location Info	Endoplasmic reticulum;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Plasma proteins, Predicted membrane proteins
Uniport_ID	Q9P0L0
HGNC ID	HGNC:12648
VEGA ID	OTTHUMG00000131603
OMIM ID	605703
String ID	9606.ENSP00000345656
Drugbank ID	BE0009211
PharmGKB ID	PA37272

Target gene [VAPA] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008346	chr18	11	2	2	15	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of VAPA expression and immune infiltrating cell level correlation result in HIV+ samples
VAPA expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of VAPA expression and immune infiltrating cell level correlation result in HIV+ samples
VAPA expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).