HIV Target gene Detail Information

> USP48 Gene Search Result

Gene Information

Gene Name	USP48
Gene ID	84196
Gene Full Name	ubiquitin specific peptidase 48
Gene Alias	USP31; RAP1GA1
Transcripts	ENSG00000090686
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;Mitochondria;
HPA Protein Class Info	Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q86UV5
HGNC ID	HGNC:18533
VEGA ID	OTTHUMG00000007798
OMIM ID	617445
String ID	9606.ENSP00000309262
PharmGKB ID	PA134947522

Target gene [USP48] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002093	chr1	76	7	29	112	View
4007095	chr1	19	1	1	21	View
4007830	chr1	1	14	2	17	View
4007992	chr1	15	2		17	View
4010478	chr1	9			9	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).