HIV Target gene Detail Information

> USP47 Gene Search Result


Gene Information
Gene Name USP47
Gene ID 55031
Gene Full Name ubiquitin specific peptidase 47
Gene Alias TRFP
Transcripts ENSG00000170242
Virus HIV
Gene Type protein coding
HPA Location Info Intermediate filaments;Vesicles;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q96K76
HGNC ID HGNC:20076
VEGA ID OTTHUMG00000165685
OMIM ID 614460
String ID 9606.ENSP00000433146
PharmGKB ID PA134880952
Target gene [USP47] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002022 chr11 62 41 14 117 View
4004694 chr11 38 1 1 40 View
4006522 chr11 23 1 24 View
4007099 chr11 9 10 2 21 View
4012048 chr11 3 2 5 View
4013780 chr11 3 3 View
4015871 chr11 0 View
4016481 chr11 0 View
4100044 chr11 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).