HIV Target gene Detail Information

> USP30 Gene Search Result


Gene Information
Gene Name USP30
Gene ID 84749
Gene Full Name ubiquitin specific peptidase 30
Transcripts ENSG00000135093
Virus HIV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q70CQ3
HGNC ID HGNC:20065
VEGA ID OTTHUMG00000133613
OMIM ID 612492
String ID 9606.ENSP00000257548
PharmGKB ID PA134971149
Target gene [USP30] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4007838 chr12 13 4 17 View
4008222 chr12 16 16 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).