HIV Target gene Detail Information

> USP3 Gene Search Result


Gene Information
Gene Name USP3
Gene ID 9960
Gene Full Name ubiquitin specific peptidase 3
Gene Alias UBP; SIH003
Transcripts ENSG00000140455
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Midbody ring;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9Y6I4
HGNC ID HGNC:12626
VEGA ID OTTHUMG00000172309
OMIM ID 604728
String ID 9606.ENSP00000369681
PharmGKB ID PA37251
Target gene [USP3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000078 chr15 225 374 667 1266 View
4000219 chr15 442 106 158 706 View
4001323 chr15 17 56 105 178 View
4001797 chr15 121 7 3 131 View
4004463 chr15 40 4 44 View
4005037 chr15 29 5 2 36 View
4008002 chr15 16 1 17 View
4008601 chr15 8 6 14 View
4009443 chr15 11 11 View
4011049 chr15 4 3 7 View
4012456 chr15 5 5 View
4013160 chr15 1 3 4 View
4013861 chr15 1 2 3 View
4015910 chr15 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).