HPV Target gene Detail Information

> USP17L6P Gene Search Result

Gene Information

Gene Name	USP17L6P
Gene ID	391622
Gene Alias	DUB4; vDUB4; USP17L6
Transcripts	ENSG00000205946
Virus	HPV
Gene Type	pseudo
HPA Location Info
HGNC ID	HGNC:37179
VEGA ID	OTTHUMG00000160200

Target gene [USP17L6P] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5201138	chr4				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)
HNSC (TCGA)	Head and Neck squamous cell carcinoma	566	Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of USP17L6P expression and immune infiltrating cell level correlation result in HPV+ samples
USP17L6P expression: Low -> High

> Dataset: HNSC
HeatMap of cell type fractions in all samples	Lollipop of USP17L6P expression and immune infiltrating cell level correlation result in HPV+ samples
USP17L6P expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).