HIV Target gene Detail Information

> UPF3B Gene Search Result


Gene Information
Gene Name UPF3B
Gene ID 65109
Gene Full Name UPF3B, regulator of nonsense mediated mRNA decay
Gene Alias MRX62; UPF3X; HUPF3B; MRXS14; RENT3B; UPF3BP1; UPF3BP2; UPF3BP3; Upf3p-X
Transcripts ENSG00000125351
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoli;Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q9BZI7
HGNC ID HGNC:20439
VEGA ID OTTHUMG00000022282
OMIM ID 300298
String ID 9606.ENSP00000276201
PharmGKB ID PA128394708
Target gene [UPF3B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4006585 chrX 14 8 2 24 View
4006586 chrX 14 8 2 24 View
4006587 chrX 14 8 2 24 View
4006588 chrX 14 8 2 24 View
4006589 chrX 14 8 2 24 View
4006590 chrX 14 8 2 24 View
4006591 chrX 14 8 2 24 View
4006592 chrX 14 8 2 24 View
4006593 chrX 14 8 2 24 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).