HTLV1 Target gene Detail Information

> UPF2 Gene Search Result

Gene Information

Gene Name	UPF2
Gene ID	26019
Gene Full Name	UPF2, regulator of nonsense mediated mRNA decay
Gene Alias	HUPF2; RENT2; smg-3
Transcripts	ENSG00000151461
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;Cytoplasmic bodies;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9HAU5
HGNC ID	HGNC:17854
VEGA ID	OTTHUMG00000017678
OMIM ID	605529
String ID	9606.ENSP00000348708
PharmGKB ID	PA134945630

Target gene [UPF2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6006450	chr10	56	4	8	68	View
6021127	chr10	5	1		6	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).