EBV Target gene Detail Information

> UMAD1 Gene Search Result


Gene Information
Gene Name UMAD1
Gene ID 729852
Gene Full Name UBAP1-MVB12-associated (UMA) domain containing 1
Gene Alias RPA3OS; RPA3-AS1
Transcripts ENSG00000219545
Virus EBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
HGNC ID HGNC:48955
VEGA ID OTTHUMG00000152007
PharmGKB ID PA166123751
Target gene [UMAD1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000592 chr7 9 1 10 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of UMAD1 expression and immune infiltrating cell level correlation result in EBV+ samples
UMAD1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).