HIV Target gene Detail Information

> UFSP2 Gene Search Result


Gene Information
Gene Name UFSP2
Gene ID 55325
Gene Full Name UFM1 specific peptidase 2
Gene Alias BHD; SEMDDR; C4orf20
Transcripts ENSG00000109775
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Uniport_ID Q9NUQ7
HGNC ID HGNC:25640
VEGA ID OTTHUMG00000160441
OMIM ID 611482
String ID 9606.ENSP00000264689
PharmGKB ID PA162408529
Target gene [UFSP2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4006384 chr4 25 25 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of UFSP2 expression and immune infiltrating cell level correlation result in HIV+ samples
UFSP2 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of UFSP2 expression and immune infiltrating cell level correlation result in HIV+ samples
UFSP2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).