HPV Target gene Detail Information

> UCA1 Gene Search Result


Gene Information
Gene Name UCA1
Gene ID 652995
Gene Alias CUDR; UCAT1; LINC00178; NCRNA00178; onco-lncRNA-36
Transcripts ENSG00000214049
Virus HPV
Gene Type ncRNA
HPA Location Info
Gene Function Oncogene
HGNC ID HGNC:37126
VEGA ID OTTHUMG00000182287
OMIM ID 617500
Rfam ID RF02202
lncRNASNP2 ID NONHSAG025011.2
PharmGKB ID PA165394504
Target gene [UCA1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5200280 chr19 141 6 147 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).