HIV Target gene Detail Information

> UBXN2A Gene Search Result

Gene Information

Gene Name	UBXN2A
Gene ID	165324
Gene Full Name	UBX domain protein 2A
Gene Alias	UBXD4
Transcripts	ENSG00000173960
Virus	HIV
Gene Type	protein coding
HPA Location Info	Centrosome;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	P68543
HGNC ID	HGNC:27265
VEGA ID	OTTHUMG00000125497
String ID	9606.ENSP00000312107
PharmGKB ID	PA162408375

Target gene [UBXN2A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005706	chr2	10	20		30	View
4013892	chr2	3			3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of UBXN2A expression and immune infiltrating cell level correlation result in HIV+ samples
UBXN2A expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of UBXN2A expression and immune infiltrating cell level correlation result in HIV+ samples
UBXN2A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).