HBV Target gene Detail Information

> UBE4B Gene Search Result


Gene Information
Gene Name UBE4B
Gene ID 10277
Gene Full Name ubiquitination factor E4B
Gene Alias E4; UFD2; HDNB1; UBOX3; UFD2A
Transcripts ENSG00000130939
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Enzymes, Plasma proteins, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID O95155
HGNC ID HGNC:12500
VEGA ID OTTHUMG00000001797
OMIM ID 613565
String ID 9606.ENSP00000343001
PharmGKB ID PA37148
Target gene [UBE4B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001305 chr1 626 44 121 791 View
1006831 chr1 32 1 33 View
1010592 chr1 11 11 View
1403624 chr1 11 11 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of UBE4B expression and immune infiltrating cell level correlation result in HBV+ samples
UBE4B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).