HIV Target gene Detail Information

> UBE3D Gene Search Result

Gene Information

Gene Name	UBE3D
Gene ID	90025
Gene Full Name	ubiquitin protein ligase E3D
Gene Alias	H10BH; UBE2CBP; YJR141W; C6orf157
Transcripts	ENSG00000118420
Virus	HIV
Gene Type	protein coding
HPA Location Info	Rods & Rings;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q7Z6J8
HGNC ID	HGNC:21381
VEGA ID	OTTHUMG00000015108
OMIM ID	612495
String ID	9606.ENSP00000358762
PharmGKB ID	PA162407873

Target gene [UBE3D] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008374	chr6	15			15	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of UBE3D expression and immune infiltrating cell level correlation result in HIV+ samples
UBE3D expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).