HIV Target gene Detail Information

> UBE2W Gene Search Result

Gene Information

Gene Name	UBE2W
Gene ID	55284
Gene Full Name	ubiquitin conjugating enzyme E2 W
Gene Alias	UBC16; UBC-16
Transcripts	ENSG00000104343
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoli;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q96B02
HGNC ID	HGNC:25616
VEGA ID	OTTHUMG00000164517
OMIM ID	614277
String ID	9606.ENSP00000397453
PharmGKB ID	PA142670657

Target gene [UBE2W] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000597	chr8	330	20	2	352	View
4009279	chr8	12			12	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of UBE2W expression and immune infiltrating cell level correlation result in HIV+ samples
UBE2W expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of UBE2W expression and immune infiltrating cell level correlation result in HIV+ samples
UBE2W expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).